gtdb 话题在 GitHub 上没有填写简介，这里按 Star 数汇总最相关的热门仓库。
ganon2 classifies genomic sequences against large sets of references efficiently, with integrated download and update of databases (refseq/genbank), taxonomic profiling (ncbi/gtdb), binning and hierarchical classification, customized reporting and more
FlexTaxD（灵活分类数据库）——创建、添加、合并不同的分类源（QIIME、GTDB、NCBI 等）并创建宏基因组数据库（如 kraken2、ganon 等）
GTDB taxonomy taxdump files with trackable TaxIds
A Python package for obtaining, parsing and exploring biological taxonomies (GTDB, NCBI, Silva, Greengenes, OTT)
用于查询基因组分类数据库（GTDB）的CLI工具。批次搜索、基因组卡片、分类单元谱系及跨释放分类比较。JSON ·CSV ·圣斯维尔·很久。
Web scraper to retrieve protein data catalogued by the CAZy, UniProt, NCBI, GTDB and PDB websites/databases.
Protal 是基于全基因组散弹测序数据进行分类分析的工具。以GTDB标记基因为参考，protal能够覆盖大多数描述的细菌。Protal还能够区分样本间的种内变异。
Mapping NCBI Genbank accession to GTDB accession
Benchmarking various taxonomic classifiers for profiling soil metagenomic data, with scripts and tools tailored for fungal, bacterial, and archaeal genome identification.
Adaptive HGT-aware phylogenomic pipeline for prokaryotic marker gene selection and species tree inference — pip install markerfinder (PyPI)
该项目在 GitHub 上没有填写描述
该项目在 GitHub 上没有填写描述
A tool for phlyo tree, a phylogenetic tree construction software.
Unofficial GTDB adaptation of neoHGT2 for horizontal gene transfer detection: local-only GTDB reference builds, stable synthetic taxIds, GTDB ranks/donor labels, and an optional hybrid NCBI+GTDB tree.
A library for parsing Newick format files, especially GTDB tree files.
Align and merge NCBI Taxonomy and GTDB into a unified, consistent OWL knowledge graph (with optional iNaturalist common names).
https://gtdb.ecogenomic.org/ gro.cimoИegoce.dbtg