pdb 开源项目推荐（570 个）

icsharpcode /ILSpy

支持 PDB 生成、ReadyToRun、元数据（及更多功能）的 .NET 反编译器——跨平台！

inducer /pudb

Python的全屏控制台调试器

pdbpp /pdbpp

pdb++, a drop-in replacement for pdb (the Python debugger)

BradyAJohnston /MolecularNodes

由几何节点提供支持的Blender中的分子动画格式。

crosire /blink

A tool which allows you to edit source code of any MSVC C++ project live at runtime

plasma-umass /ChatDBG

ChatDBG - AI-assisted debugging. Uses AI to answer 'why'

spiside /pdb-tutorial

A simple tutorial about effectively using pdb

ajkhoury /ReClassEx

ReClassEx

horsicq /PDBRipper

PDBRipper is a utility for extract an information from PDB-files.

sakhnik /nvim-gdb

Neovim thin wrapper for GDB, LLDB, PDB/PDB++ and BashDB

BioPandas /biopandas

Working with molecular structures in pandas DataFrames

mdtraj /mdtraj

An open library for the analysis of molecular dynamics trajectories

pharmai /plip

蛋白质-配体相互作用剖析器——根据Schake、Bolz等（2025）https://doi.org/10.1093/nar/gkaf361 分析和可视化PDB文件📝中的非共价蛋白-配体相互作用

Mixaill /FakePDB

Tool for PDB generation from IDA Pro database

biojava /biojava

📖🔬☕ BioJava is an open-source project dedicated to providing a Java library for processing biological data.

charnley /rmsd

Calculate Root-mean-square deviation (RMSD) of two molecules, using rotation, in xyz or pdb format

rdk /p2rank

P2Rank: Protein-ligand binding site prediction from protein structure based on machine learning.

getsentry /pdb

A parser for Microsoft PDB (Program Database) debugging information

haddocking /pdb-tools

A dependency-free cross-platform swiss army knife for PDB files.

ergrelet /windiff

Tool that allows comparing symbol, type and syscall information of Microsoft Windows binaries across different versions of the OS, using a Web UI and/or LLMs.