singularity 开源项目推荐（760 个）

nextflow-io /nextflow

用于数据驱动计算流水线的 DSL

apptainer /singularity

Singularity has been renamed to Apptainer as part of us moving the project to the Linux Foundation. This repo has been persisted as a snapshot right before the changes.

apptainer /apptainer

Apptainer: Application containers for Linux

pharmai /plip

蛋白质-配体相互作用剖析器——根据Schake、Bolz等（2025）https://doi.org/10.1093/nar/gkaf361 分析和可视化PDB文件📝中的非共价蛋白-配体相互作用

NVIDIA /hpc-container-maker

HPC Container Maker

glotzerlab /hoomd-blue

Molecular dynamics and Monte Carlo soft matter simulation on GPUs.

getpopper /popper

容器原生任务自动化引擎。

singularityhub /docker2singularity

A docker image for converting docker images to singularity images.

Azure /batch-shipyard

Simplify HPC and Batch workloads on Azure

StaPH-B /docker-builds

📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics

x11vnc /x11vnc-desktop

Docker/Singularity image for Ubuntu with X11 and VNC

SciLifeLab /Sarek

Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing

singularityhub /singularity-hpc

Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.

bdusell /singularity-tutorial

Tutorial for using Singularity containers

sylabs /wlm-operator

Singularity implementation of k8s operator for interacting with SLURM.

sylabs /singularity-cri

The Singularity implementation of the Kubernetes Container Runtime Interface

netreconlab /parse-hipaa

HIPAA & GDPR compliant ready parse-server with postgres/mongo, parse-hipaa-dashboard. Compatible with ParseCareKit

biocorecrg /master_of_pores

Nextflow pipeline for analysis of direct RNA Nanopore reads

singularityhub /sregistry

server for storage and management of singularity images

JuliaContainerization /SimpleContainerGenerator.jl

Create container images for using Julia packages (especially useful in environments without Internet access)