bwa 开源项目推荐（121 个）

divonlan /genozip

A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too

ngless-toolkit /ngless

NGLess: NGS with less work

StevenWingett /FastQ-Screen

Detecting contamination in NGS data and multi-species analysis

4dn-dcic /docker-4dn-hic

Docker for 4DN Hi-C processing pipeline

fg-labs /bwa-mem3

Accelerated short-read alignment, derived from bwa-mem2 — drop-in replacement with correctness fixes, performance improvements, single-binary methylation, and shared-memory index.

plmilord /Hass.io-custom-component-spaclient

Home Assistant integration - Spa Client

IARCbioinfo /alignment-nf

Whole Exome/Whole Genome Sequencing alignment pipeline

Juke34 /AliNe

Nextflow Alignment Pipeline - from fastq.gz to sorted bam/cram with ease

databricks /genomics-pipelines

secondary analysis pipelines parallelized with apache spark

SushiLab /mVIRs

该项目在 GitHub 上没有填写描述

GalieJJ /accounti

Open-source AI-powered bookkeeping automation for German businesses. Auto-classify transactions (SKR03/SKR04), generate journal entries, create BWA reports, and export DATEV-compatible files. Rules-first, LLM-assisted, human-supervised.

TRON-Bioinformatics /tronflow-alignment

Nextflow pipeline for BWA, BWA2 and STAR alignments

mnievesc /Ancient_mtDNA_Pipeline

Analysis pipeline for processing paired-end Illumina reads obtained after ancient mtDNA target enrichment capture.

abs-tudelft /variant-calling-at-scale

Scalable and High Performance Variant Calling on Cluster Environments

jonathanBieler /BurrowsWheelerAligner.jl

Binding for bwa

rifkiramadhan /bwa-storegg-server

Ini adalah project Server-Side dari kelas BWA MERN 2021

DKFZ-ODCF /AlignmentAndQCWorkflows

The DKFZ alignment workflow plugin originally developed at the eilslabs

fg-labs /bwa-mem3-rs

Rust FFI crate for bwa-mem3 with packed-BAM output and caller-owned parallelism

fg-labs /minibwa-bindings

Rust and Python bindings for minibwa — Heng Li's lightweight bwa

rifkiramadhan /bwa-storegg-client

Ini adalah project Client-Side dari kelas BWA MERN 2021