gene-fusions 开源项目推荐（9 个）

suhrig /arriba

利用RN-Seq数据快速准确地检测基因融合

Oshlack /MINTIE

Method for Identifying Novel Transcripts and Isoforms using Equivalence classes, in cancer and rare disease.

BirolLab /pavfinder

🔍 Post Assembly Variants Finder

skchronicles /RNA-seek

A comprehensive quality-control and quantification RNA-seq pipeline

OpenOmics /RNA-seek

A comprehensive quality-control and quantification RNA-seq pipeline

DKruttika /Multi-omics-projects

Multi-omics projects on High grade serous ovarian cancer samples

paulstothard /chimeric-mitochondrial-RNA-analysis

Methods and scripts used to characterize chimeric mitochondrial RNA transcripts.

oicr-gsi /starFusion

Workflow that takes a fastq pair or optionally a chimeric file from STAR and detects RNA-seq fusion events.

gsumathipala /cancer-genomics-pipelines

Somatic variant and fusion calling for Illumina cancer panels: DNA (SNVs/indels via GATK) and RNA (gene fusions via STAR + Arriba), with clinical interpretation through PCGR. Panel profiles for 22 kits. Research use only — not a validated diagnostic system.