biopython 开源项目推荐（463 个）

biopython /biopython

Official git repository for Biopython (originally converted from CVS)

plotly /dash-cytoscape

Interactive network visualization in Python and Dash, powered by Cytoscape.js

ponnhide /pyCircos

python Circos

Binomica-Labs /SpliceCraft

Terminal-based plasmid map viewer, sequence editor, and cloning/mutagenesis workbench in pure Python

pydna-group /pydna

用Python克隆！双链DNA数据结构及同源重组模拟、Gibson组装、切割粘贴克隆。

modernatx /seqlike

Unified biological sequence manipulation in Python

wheretrue /biobear

Work with bioinformatic files using Arrow, Polars, and/or DuckDB

cogent3 /cogent3

Comparative Genomics Toolkit 3

chris-rands /biopython-coronavirus

Biopython Jupyter Notebook tutorial to characterize a small genome

fabilab /iplotx

Visualise networks and trees in Python, with style.

Zsailer /phylopandas

Pandas DataFrames for phylogenetics

moshi4 /phyTreeViz

Simple phylogenetic tree visualization python package for phylogenetic analysis

SevdanurGENC /Bioinformatics-with-Biopython-Lecture-Notes

This repo contains Bioinformatics lecture notes using Biopython.

yachielab /QUEEN

QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources

pyladies-brazil /grupo-estudo-bioinformatica

Repositório do grupo de estudo de Bioinformática da rede de comunidades das PyLadies Brasil.

althonos /pyorthoani

A Python implementation of the OrthoANI algorithm for nucleotide identity measurement.

RKMlab /perf

PERF is an Exhaustive Repeat Finder

RK900 /Flu-Prediction

Predicting Future Influenza Virus Sequences with Machine Learning

Edinburgh-Genome-Foundry /SnapGeneReader

👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

moshi4 /GBKviz

Easy-to-use web application for visualization and comparison of genomes in Genbank file