biomodels 开源项目推荐（13 个）

cokelaer /bioservices

通过Python访问生物网络服务。

VirtualPatientEngine /AIAgents4Pharma

用于药物发现、药物开发及其他药物研发的人工智能代理

virtualcell /VCell-AI

An AI-powered platform for discovering, analyzing, and exploring biomodels from the VCell database. Built as part of Google Summer of Code (GSoC25), this project combines modern web technologies with AI capabilities to provide an intuitive interface for scientific model research.

KacemMathlouthi /VCell-Demo

a demo of a chatbot for querying and interpreting biomodels stored in the VCell BioModel Database. It enables users to interact with biological modeling resources using natural language and provides structured outputs, model metadata, downloadable files, and visualizations in real time.

dyscolab /biomodels

Python library to download and cache models from BioModels

cthoyt /biomodels-metadata-analysis

Generate a summary of metadata annotations in the BioModels database

Erezinho /TheAnalyzer

The Analyzer project goal is to detect clusters of points in n dimensional space and project it to m dimensional space

ClementRasp /MMNetReduce

该项目在 GitHub 上没有填写描述

jomiapangilinan /AI-Life

Computational generation of adaptive, simulated, and artistic media that resemble the complex philosophy and aesthetics of life and nature

biosimulations /biomodels-qc

Quality control tool for the BioModels repository of biochemical models

EBI-BioModels /common-entities

External package for POJO, domain or entity classes used across interconnected and relevant projects.

ansh-info /AI-Agents

Hierarchical multi-agent AI system designed to perform complex tasks to enable AI-driven research, document analysis, and intelligent interaction.

pipeworx-io /mcp-biomodels

BioModels — the public repository of curated, executable mathematical models of biological systems (SBML, CellML, BioPAX and more), searchable by pathway, disease, organism, gene or author, with the model files themselves and the paper each model came from.