bgzf 开源项目推荐（13 个）

mdshw5 /pyfaidx

对fasta子序列的高效Python随机访问

circulosmeos /gztool

extract random-positioned data from gzip files with no penalty, including gzip tailing like with 'tail -f' !

MatthewRalston /kmerdb

Python CLI for alignment-free genomics.

cielavenir /7bgzf

bgzf/ciso/daxcr/dictzip/gzinga/migz/razf frontends using zlib/zlib-ng/7-zip/zopfli/libdeflate/miniz/libslz/igzip/cryptopp/kzip backends with parallel (de)compression. compilable with gcc/clang/icc/open64.

nh13 /rebgzf

Efficient gzip to BGZF transcoder using half-decompression (2-4x faster than decompress+recompress)

vivimice /bgzf-randreader

A BGZF random access reader library

circulosmeos /bgztail

Continuous tail command (like `tail -f`) for bgzip files

chrovis /bgzf4j

bgzf4j is a compression library for BGZF (Blocked GNU Zip Format)

clinbiolab /OMGzip

OMGzip: Optimized Multithreaded Gzip decompressor. Up to 2x faster than rapidgzip.

clintval /pybgzf

Streaming BGZF compression with on-the-fly tabix and CSI indexing

innovate-invent /bampy

Python implementation of htslib supporting BAM, SAM, and BGZF compression

foxforensics /go-bgzf

BGZF reader in Go.

eneskemalergin /zipir

Streaming DEFLATE-family compression library and CLI in Zig 0.16. std.Io readers and writers, fixed caller-owned memory, no dependencies.