analysis-pipeline 开源项目推荐（46 个）

seandavi /awesome-single-cell

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

grailbio /reflow

A language and runtime for distributed, incremental data processing in the cloud

tonyfischetti /assertr

Assertive programming for R analysis pipelines

cdeldon /thermography

Automatic detection of defected solar panel modules

AllenInstitute /ecephys_spike_sorting

Modules for processing extracellular electrophysiology data from Neuropixels probes

enormandeau /barque

eDNA metabarcoding pipeline

1313e /PRISM

An alternative to MCMC for rapid analysis of models

genepi /cloudgene

A framework to build Software As A Service (SaaS) platforms for data analysis pipelines.

Mu-Sigma /analysis-pipelines

Enables data scientists to compose pipelines of analysis which consist of data manipulation, exploratory analysis & reporting, as well as modeling steps. Data scientists can use tools of their choice through an R interface, and compose interoperable pipelines between R, Spark, and Python.

USDA-VS /vSNP

vSNP -- validate SNPs

sdss /mangadap

The MaNGA Data Analysis Pipeline

USDA-VS /vSNP3

vSNP -- validate SNPs

JetBrains-Research /bitcode-tools

Gradle tools to analyze bitcode of a Kotlin/Native project

ahujaraman /spark_kafka_tweet_analysis

What people are tweeting about now, in your desired location? Live Streaming of Twitter Data to Spark and Tweet Analysis application on various trends Eg: Trending HashTags, Trending Mentions etc. Location based features supported.

mkongsore /BlipFinder

分析流水线，能够通过真实或模拟 Gaia DR4 数据中的天体测量透镜效应搜寻银河系中的暗致密天体。

ynikitenko /lena

Lena is an architectural framework for data analysis

WormLabCaltech /alaska

Automated and friendly RNA-seq analysis (deprecated)

abhijeetsingh1704 /AcetoScan

AcetoScan - Automated pipeline for the unsupervised analysis of FTHFS amplicon sequencing

CTLife /PipiDABS

PipiDABS: A Comprehensive and User-Friendly Pipeline for Downstream DNA Methylation Analysis of High-throughput Bisulfite Sequencing Data.

weng-lab /krews

KREWS Scientific Data Pipeline Framework