tabix 开源项目推荐（21 个）

tabixio /tabix

Tabix.io 用户界面

tao-bioinfo /gff3sort

GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools

zhanxw /seqminer

Query sequence data (VCF/BCF1/BCF2, Tabix, BGEN, PLINK) in R

bejobioinformatics /tabixpy

Tabix reader written 100% in Python

schesa /clickhouse-tabix

docker-compose for tabix, clickhouse-server and mariadb

BioJulia /Indexes.jl

该项目在 GitHub 上没有填写描述

alex-kabin /clickhouse-cluster-docker

Sample Clickhouse cluster deployment with chproxy

alexpreynolds /tabix-service

A nodejs-based service for requests for tabix-indexed genomic data

HuntsmanCancerInstitute /GQuery

GQuery is a software tool for rapidly querying large numbers of bgzip compressed, tabix indexed genomic data files e.g. vcf, maf, bed, bedGraph, etc. from multiple species with different genome builds without the need to develop, debug, and maintain custom file parsers. Search for particular germline or somatic mutations, copy number changes, di…

ARyaskov /bioinf-binaries

Community builds for the main bioinformatics software - Samtools, Tabix, Bcftools, CD-HIT

tabixio /tabix.backend

tabix.io Backend

NahButch /vcf_mcp

MCP Connector for VCF Genetic Data File(s). Single, multiple, comparison, data setting, etc.

AntonLavrukhin /SQL_projects

SQL projects

benjschiller /tabix

Historical archive: old tabix fork for Windows support for pysam-era workflows. Not maintained; use upstream htslib.

clintval /pybgzf

Streaming BGZF compression with on-the-fly tabix and CSI indexing

dipdup-io /tabix-docker

Tabix (nginx based) docker image

annaeremina96 /SQL_karpov_courses

Works completed within the SQL module of the Data Analyst course on the Karpov Courses platform

RajLabMSSM /echotabix

echoverse module: Tabix indexing and querying.

huishenlab /iscream

Make fast and memory efficient BED file queries, summaries, and matrices.

jadzoghaib /mendelea

Bitemporal evidence timeline for reported genetic variants: reconstructs what ClinVar asserted on any past date and reports what has moved since. Range-queried ingest, multi-tenant isolation enforced by an AST guard, tamper-evident review ledger. Research use only.