CMU-SAFARI /RawHash
RawHash 能够准确高效地将原始纳米孔信号实时比对到不同大小的参考基因组(例如,从病毒基因组到人类基因组),无需碱基识别。由 Firtina 等人描述(发表于 https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440)。
C71
relative-abundances 话题在 GitHub 上没有填写简介,这里按 Star 数汇总最相关的热门仓库。
RawHash 能够准确高效地将原始纳米孔信号实时比对到不同大小的参考基因组(例如,从病毒基因组到人类基因组),无需碱基识别。由 Firtina 等人描述(发表于 https://academic.oup.com/bioinformatics/article/39/Supplement_1/i297/7210440)。
Compare different differential abundance and expression methods
Scripts for reproducing results shown in Gupta VK et al. "A Predictive Index for Health Status using Species-level Gut Microbiome Profiling". Nature Communications, 2020. https://doi.org/10.1038/s41467-020-18476-8.
🦠Research project in Bioinformatics Institute 2023-2024
RiboTaxa: combined approaches for rRNA genes taxonomic resolution down to the species level from metagenomics data revealing novelties.