Heimdall MCP Server - Your AI Coding Assistant’s Long-Term Memory

The Problem: Your AI coding assistant has short-lived memory. Every chat session starts from a blank slate.
The Solution: Heimdall gives your LLM a persistent, growing, cognitive memory of your specific codebase, lessons and memories carry over time.
https://github.com/user-attachments/assets/120b3d32-72d1-4d42-b3ab-285e8a711981
Key Features
- 🧠 Context-Rich Memory: Heimdall learns from your documentation, session insights, and development history, allowing your LLM to recall specific solutions and architectural patterns across conversations.
- 📚 Git-Aware Context: It indexes your project’s entire git history, understanding not just what changed, but also who changed it, when, and context.
- 🔗 Isolated & Organized: Each project gets its own isolated memory space, ensuring that context from one project doesn’t leak into another.
- ⚡ Efficient Integration: Built on the Model Context Protocol (MCP), it provides a standardized, low-overhead way for LLMs to access this powerful memory.
🚀 Getting Started
Prerequisites: Python 3.11+ and Docker (for Qdrant vector database).
Heimdall provides a unified heimdall CLI that manages everything from project setup to MCP integration.
1. Install Heimdall
pip install heimdall-mcp
This installs the heimdall command-line tool with all necessary dependencies.
2. Initialize Your Project
Navigate to your project directory and set up Heimdall:
cd /path/to/your/project
# Initialize project memory (starts Qdrant, creates collections, sets up config)
heimdall project init
This single command interactively builds up everything asking user preferences:
- ✅ Starts Qdrant vector database automatically
- ✅ Creates project-specific memory collections
- ✅ Sets up
.heimdall/ configuration directory
- ✅ Downloads required AI models
- ✅ File monitoring
- ✅ Git hooks
- ✅ MCP integration
Note: this creates a .heimdall/ directory in your project for configuration - you should NOT commit this - add to .gitignore!
Load Project Knowledge
Recommended: Use automatic file monitoring and place files in .heimdall/docs/:
# Copy or symlink your documentation to the monitored directory
ln -r -s my-project-docs ./.heimdall/docs/project-docs
# Start automatic monitoring (files are loaded instantly when changed)
heimdall monitor start
Alternative: Manual loading for one-time imports:
# Load documentation and files manually
heimdall load docs/ --recursive
heimdall load README.md
Your project’s memory is now active and ready for your LLM.
Real-time Git Integration
You can parse your entire git history with:
# Load git commit history
heimdall git-load .
You can also install git hooks for automatic memory updates on commits:
# Install the post-commit hook (Python-based, cross-platform)
heimdall git-hooks install
Note: If you have existing post-commit hooks, they’ll be safely chained and preserved - but proceed carefully.
🧹 Cleanup
To remove Heimdall from a project:
# Navigate to the project you want to clean up
cd /path/to/project
# Cleanup data, remove collections, uninstall git hooks
memory_system project clean
This cleanly removes project-specific data while preserving the shared Qdrant instance for other projects.
⚙️ How It Works Under the Hood
Heimdall extracts unstructured knowledge from your documentation and structured data from your git history. This information is vectorized and stored in a Qdrant database. The LLM can then query this database using a simple set of tools to retrieve relevant, context-aware information.
graph TD
%% Main client outside the server architecture
AI_Assistant["🤖 AI Assistant (e.g., Claude)"]
%% Top-level subgraph for the entire server
subgraph Heimdall MCP Server Architecture
%% 1. Application Interface Layer
subgraph Application Interface
MCP_Server["MCP Server (heimdall-mcp)"]
CLI["CognitiveCLI (heimdall/cli.py)"]
style MCP_Server fill:#b2ebf2,stroke:#00acc1,color:#212121
style CLI fill:#b2ebf2,stroke:#00acc1,color:#212121
end
%% 2. Core Logic Engine
style Cognitive_System fill:#ccff90,stroke:#689f38,color:#212121
Cognitive_System["🧠 CognitiveSystem (core/cognitive_system.py)<br/>"]
%% 3. Storage Layer (components side-by-side)
subgraph Storage Layer
Qdrant["🗂️ Qdrant Storage<br/><hr/>- Vector Similarity Search<br/>- Multi-dimensional Encoding"]
SQLite["🗃️ SQLite Persistence<br/><hr/>- Memory Metadata & Connections<br/>- Caching & Retrieval Stats"]
end
%% 4. Output Formatting
style Formatted_Response fill:#fff9c4,stroke:#fbc02d,color:#212121
Formatted_Response["📦 Formatted MCP Response<br/><i>{ core, peripheral }</i>"]
%% Define internal flow
MCP_Server -- calls --> CLI
CLI -- calls --> Cognitive_System
Cognitive_System -- "1\. Vector search for candidates" --> Qdrant
Cognitive_System -- "2\. Hydrates with metadata" --> SQLite
Cognitive_System -- "3\. Performs Bridge Discovery" --> Formatted_Response
end
%% Define overall request/response flow between client and server
AI_Assistant -- "recall_memorie" --> MCP_Server
Formatted_Response -- "Returns structured memories" --> AI_Assistant
%% --- Styling Block ---
%% 1. Node Styling using Class Definitions
classDef aiClientStyle fill:#dbeafe,stroke:#3b82f6,color:#1e3a8a
classDef interfaceNodeStyle fill:#cffafe,stroke:#22d3ee,color:#0e7490
classDef coreLogicStyle fill:#dcfce7,stroke:#4ade80,color:#166534
classDef qdrantNodeStyle fill:#ede9fe,stroke:#a78bfa,color:#5b21b6
classDef sqliteNodeStyle fill:#fee2e2,stroke:#f87171,color:#991b1b
classDef responseNodeStyle fill:#fef9c3,stroke:#facc15,color:#854d0e
%% 2. Assigning Classes to Nodes
class AI_Assistant aiClientStyle
class MCP_Server,CLI interfaceNodeStyle
class Cognitive_System coreLogicStyle
class Qdrant qdrantNodeStyle
class SQLite sqliteNodeStyle
class Formatted_Response responseNodeStyle
%% 3. Link (Arrow) Styling
%% Note: Styling edge label text is not reliably supported. This styles the arrow lines themselves.
%% Primary request/response flow (links 0 and 1)
linkStyle 0,1 stroke:#3b82f6,stroke-width:2px
%% Internal application calls (links 2 and 3)
linkStyle 2,3 stroke:#22d3ee,stroke-width:2px,stroke-dasharray: 5 5
%% Internal data access calls (links 4 and 5)
linkStyle 4,5 stroke:#9ca3af,stroke-width:2px
%% Final processing call (link 6)
linkStyle 6 stroke:#4ade80,stroke-width:2px
You can instruct your LLM to use the following six tools to interact with its memory:
| Tool |
Description |
store_memory |
Stores a new piece of information, such as an insight or a solution. |
recall_memories |
Performs a semantic search for relevant memories based on a query. |
session_lessons |
Records a key takeaway from the current session for future use. |
memory_status |
Checks the health and statistics of the memory system. |
delete_memory |
Delete a specific memory by its unique ID. |
delete_memories_by_tags |
Delete all memories that have any of the specified tags. |
💡 Best Practices
To maximize the effectiveness of Heimdall:
- Provide Quality Documentation: Think architecture decision records, style guides, and API documentation.
- Keep documents updated: Heilmdall will use documents in
.heimdall/docs to provide memories - if they are outdated, so will be the memories. We suggest you use symbolic links to your actual docs directory in .heimdall/docs so Heimdall automatically refreshes memories with latest document versions.
- Maintain Good Git Hygiene: Write clear and descriptive commit messages. A message like
feat(api): add user authentication endpoint is far more valuable than more stuff.
- Set Up Automation: Use
heimdall monitor start and heimdall git-hooks install for hands-free memory updates.
- Guide Your Assistant: Use a system prompt (like a
CLAUDE.md file) to instruct your LLM on how and when to use the available memory tools.
- Use Strategic Tagging: Establish rules for your LLM to tag memories consistently. Use temporary tags like
temp-analysis, task-specific, or cleanup-after-project for memories that should be deleted after completion, enabling easy cleanup with delete_memories_by_tags.
🛠️ Command Reference
Core Commands
| Command |
Description |
heimdall store <text> |
Store experience in cognitive memory |
heimdall recall <query> |
Retrieve relevant memories based on query |
heimdall load <path> |
Load files/directories into memory |
heimdall git-load [repo] |
Load git commit patterns into memory |
heimdall status |
Show system status and memory statistics |
heimdall remove-file <path> |
Remove memories for deleted file |
heimdall delete-memory <id> |
Delete specific memory by ID |
heimdall delete-memories-by-tags --tag <tag> |
Delete memories by tags |
heimdall doctor |
Run comprehensive health checks |
heimdall shell |
Start interactive memory shell |
Project Management
| Command |
Description |
heimdall project init |
Initialize project memory with interactive setup |
heimdall project list |
List all projects in shared Qdrant instance |
heimdall project clean |
Remove project collections and cleanup |
Vector Database (Qdrant)
| Command |
Description |
heimdall qdrant start |
Start Qdrant vector database service |
heimdall qdrant stop |
Stop Qdrant service |
heimdall qdrant status |
Check Qdrant service status |
heimdall qdrant logs |
View Qdrant service logs |
File Monitoring
| Command |
Description |
heimdall monitor start |
Start automatic file monitoring service |
heimdall monitor stop |
Stop file monitoring service |
heimdall monitor restart |
Restart monitoring service |
heimdall monitor status |
Check monitoring service status |
heimdall monitor health |
Detailed monitoring health check |
Git Integration
| Command |
Description |
heimdall git-hook install |
Install post-commit hook for automatic memory processing |
heimdall git-hook uninstall |
Remove Heimdall git hooks |
heimdall git-hook status |
Check git hook installation status |
MCP Integration
| Command |
Description |
heimdall mcp install <platform> |
Install MCP server for platform (vscode, cursor, claude-code, visual-studio, codex) |
heimdall mcp remove <platform> |
Remove MCP integration from platform |
heimdall mcp status |
Show installation status for all platforms |
heimdall mcp list |
List available platforms and installation status |
heimdall mcp generate <platform> |
Generate configuration snippets for manual installation |
Heimdall MCP server is compatible with any platform that supports STDIO MCP servers. The following platforms are supported for automatic installation using heimdall mcp commands.
vscode - Visual Studio Code
cursor - Cursor IDE
claude-code - Claude Code
visual-studio - Visual Studio
codex - Codex CLI (project-local CODEX_HOME config)
Technology Stack:
- Python 3.11+
- Vector Storage: Qdrant
- Mmeory information and metadata: SQLite
- Embeddings: all-MiniLM-L6-v2
- Sentiment analysis: NRCLex emotion lexicon
- Semantic analysis: spaCy
- Integration: Model Context Protocol (MCP)
🗺️Short Term Roadmap
🤝 Contributing
We welcome contributions! Please see our Contributing Guide for details on:
- Setting up the development environment
- Our dual licensing model
- Code style guidelines
- Pull request process
Important: All contributors must agree to our Contributor License Agreement before their contributions can be merged.
Quick Start for Contributors
- Fork the repository
- Create a feature branch targeting
dev (not main)
- Make your changes following our style guidelines
- Submit a pull request with the provided template
- Sign the CLA when prompted by the CLA Assistant
For questions, open an issue or start a discussion!
📄 License
This project is licensed under the Apache 2.0 License for open source use. See our Contributing Guide for information about our dual licensing model for commercial applications.
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